Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC45
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: GCF_021624045.1_ASM2162404v1_genomic
- Continent: Africa
- Source Study: Tamburini et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_JAJWHX010000080.1 | NZ_JAJWHX010000080.1_12 | 9366 | 10853 | - | GH13_5 |
| TC | NZ_JAJWHX010000080.1 | NZ_JAJWHX010000080.1_13 | 11087 | 11854 | + | 3.A.1.3.10 |
| STP | NZ_JAJWHX010000080.1 | NZ_JAJWHX010000080.1_14 | 11949 | 12935 | + | PALP |
| TC | NZ_JAJWHX010000080.1 | NZ_JAJWHX010000080.1_15 | 12951 | 13619 | + | 3.A.1.3.10 |
| TC | NZ_JAJWHX010000080.1 | NZ_JAJWHX010000080.1_16 | 13616 | 14368 | + | 3.A.1.3.10 |
Gene ID: NZ_JAJWHX010000080.1_12
Type: CAZyme
Location: 9366 - 10853 (-)
Type: CAZyme
Location: 9366 - 10853 (-)
Gene ID: NZ_JAJWHX010000080.1_13
Type: TC
Location: 11087 - 11854 (+)
Type: TC
Location: 11087 - 11854 (+)
Gene ID: NZ_JAJWHX010000080.1_14
Type: STP
Location: 11949 - 12935 (+)
Type: STP
Location: 11949 - 12935 (+)
Gene ID: NZ_JAJWHX010000080.1_15
Type: TC
Location: 12951 - 13619 (+)
Type: TC
Location: 12951 - 13619 (+)
Gene ID: NZ_JAJWHX010000080.1_16
Type: TC
Location: 13616 - 14368 (+)
Type: TC
Location: 13616 - 14368 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasivariicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| NZ_JAJWHX010000080.1_14 | vegetarian > vegan | 1.15430 | 0.01684 |