Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC41
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: GCF_021624045.1_ASM2162404v1_genomic
- CGC Family ID: CGCFAM_00447
- Continent: Africa
- Source Study: Tamburini et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_51 | 51836 | 52867 | + | 9.B.126.1.1 |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_52 | 53139 | 54461 | + | 2.A.1.6.10 |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_53 | 54504 | 56555 | - | 9.B.121.1.1 |
| STP | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_54 | 56750 | 57679 | + | PfkB |
| peptidase | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_55 | 57735 | 59237 | - | M16.UNW |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_56 | 59457 | 60743 | - | 2.A.23.1.7 |
| STP | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_57 | 60900 | 62906 | - | EAL | GGDEF |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_58 | 63149 | 66628 | - | 1.B.55.3.1 |
| CAZyme | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_59 | 66610 | 67719 | - | GH8 |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_60 | 67723 | 69156 | - | 4.D.3.1.6 |
| TC | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_61 | 69153 | 70013 | - | 4.D.3.1.6 |
| CAZyme | NZ_JAJWHX010000009.1 | NZ_JAJWHX010000009.1_62 | 70066 | 72684 | - | GT2 |
Gene ID: NZ_JAJWHX010000009.1_51
Type: TC
Location: 51836 - 52867 (+)
Type: TC
Location: 51836 - 52867 (+)
Gene ID: NZ_JAJWHX010000009.1_52
Type: TC
Location: 53139 - 54461 (+)
Type: TC
Location: 53139 - 54461 (+)
Gene ID: NZ_JAJWHX010000009.1_53
Type: TC
Location: 54504 - 56555 (-)
Type: TC
Location: 54504 - 56555 (-)
Gene ID: NZ_JAJWHX010000009.1_54
Type: STP
Location: 56750 - 57679 (+)
Type: STP
Location: 56750 - 57679 (+)
Gene ID: NZ_JAJWHX010000009.1_55
Type: peptidase
Location: 57735 - 59237 (-)
Type: peptidase
Location: 57735 - 59237 (-)
Gene ID: NZ_JAJWHX010000009.1_56
Type: TC
Location: 59457 - 60743 (-)
Type: TC
Location: 59457 - 60743 (-)
Gene ID: NZ_JAJWHX010000009.1_57
Type: STP
Location: 60900 - 62906 (-)
Type: STP
Location: 60900 - 62906 (-)
Gene ID: NZ_JAJWHX010000009.1_58
Type: TC
Location: 63149 - 66628 (-)
Type: TC
Location: 63149 - 66628 (-)
Gene ID: NZ_JAJWHX010000009.1_59
Type: CAZyme
Location: 66610 - 67719 (-)
Type: CAZyme
Location: 66610 - 67719 (-)
Gene ID: NZ_JAJWHX010000009.1_60
Type: TC
Location: 67723 - 69156 (-)
Type: TC
Location: 67723 - 69156 (-)
Gene ID: NZ_JAJWHX010000009.1_61
Type: TC
Location: 69153 - 70013 (-)
Type: TC
Location: 69153 - 70013 (-)
Gene ID: NZ_JAJWHX010000009.1_62
Type: CAZyme
Location: 70066 - 72684 (-)
Type: CAZyme
Location: 70066 - 72684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasivariicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.