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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_2 2289 3689 - GH1
CAZyme NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_3 3740 5932 - CBM35 | GH5_41
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_4 5945 7282 - LamB
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_5 7545 8816 - 4.A.3.2.6
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_6 8994 9308 + 4.A.3.2.9
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_7 9318 10640 + 4.A.3.2.6
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_8 10664 10978 + 4.A.3.2.7
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_9 11029 11943 + ROK
TF NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_10 12000 12962 + LacI
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_11 13144 14061 + 3.A.1.15.7
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_12 14058 14879 + 3.A.1.15.7
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_13 14876 15724 + 3.A.1.15.7
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_14 15718 16572 + 3.A.1.15.7
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_15 16632 16973 - YgbA_NO
TF NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_16 17041 17928 - HTH_1
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_17 18113 19054 + 2.A.69.3.5
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_18 19090 20799 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_19 20841 21134 - Rdx
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_20 21350 23713 + 1.B.14.2.7
pfam NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_21 23786 24817 + HemS | HemS | ChuX_HutX | ChuX_HutX
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_22 24814 25632 + 3.A.1.14.16
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_23 25632 26627 + 3.A.1.14.5
TC NZ_JAJWHX010000070.1 NZ_JAJWHX010000070.1_24 26620 27399 + 3.A.1.14.16
Gene ID: NZ_JAJWHX010000070.1_2
Type: CAZyme
Location: 2289 - 3689 (-)
Gene ID: NZ_JAJWHX010000070.1_3
Type: CAZyme
Location: 3740 - 5932 (-)
Gene ID: NZ_JAJWHX010000070.1_4
Type: pfam
Location: 5945 - 7282 (-)
Gene ID: NZ_JAJWHX010000070.1_5
Type: TC
Location: 7545 - 8816 (-)
Gene ID: NZ_JAJWHX010000070.1_6
Type: TC
Location: 8994 - 9308 (+)
Gene ID: NZ_JAJWHX010000070.1_7
Type: TC
Location: 9318 - 10640 (+)
Gene ID: NZ_JAJWHX010000070.1_8
Type: TC
Location: 10664 - 10978 (+)
Gene ID: NZ_JAJWHX010000070.1_9
Type: pfam
Location: 11029 - 11943 (+)
Gene ID: NZ_JAJWHX010000070.1_10
Type: TF
Location: 12000 - 12962 (+)
Gene ID: NZ_JAJWHX010000070.1_11
Type: TC
Location: 13144 - 14061 (+)
Gene ID: NZ_JAJWHX010000070.1_12
Type: TC
Location: 14058 - 14879 (+)
Gene ID: NZ_JAJWHX010000070.1_13
Type: TC
Location: 14876 - 15724 (+)
Gene ID: NZ_JAJWHX010000070.1_14
Type: TC
Location: 15718 - 16572 (+)
Gene ID: NZ_JAJWHX010000070.1_15
Type: pfam
Location: 16632 - 16973 (-)
Gene ID: NZ_JAJWHX010000070.1_16
Type: TF
Location: 17041 - 17928 (-)
Gene ID: NZ_JAJWHX010000070.1_17
Type: TC
Location: 18113 - 19054 (+)
Gene ID: NZ_JAJWHX010000070.1_18
Type: pfam
Location: 19090 - 20799 (+)
Gene ID: NZ_JAJWHX010000070.1_19
Type: pfam
Location: 20841 - 21134 (-)
Gene ID: NZ_JAJWHX010000070.1_20
Type: TC
Location: 21350 - 23713 (+)
Gene ID: NZ_JAJWHX010000070.1_21
Type: pfam
Location: 23786 - 24817 (+)
Gene ID: NZ_JAJWHX010000070.1_22
Type: TC
Location: 24814 - 25632 (+)
Gene ID: NZ_JAJWHX010000070.1_23
Type: TC
Location: 25632 - 26627 (+)
Gene ID: NZ_JAJWHX010000070.1_24
Type: TC
Location: 26620 - 27399 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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