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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_1 2 1192 - 3.A.1.14.3
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_2 1189 2079 - 3.A.1.14.3
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_3 2079 2876 - 3.A.1.14.3
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_4 2922 5135 - 1.B.14.1.2
CAZyme NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_5 5370 7922 - GT51
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_6 8507 8884 + 8.A.2.1.1
pfam NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_7 8923 9486 - T2SSB
CAZyme NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_8 9743 13030 - CBM41 | GH13_13
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_9 13337 14179 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_10 14189 16162 + 1.B.22.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_11 16159 17652 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_12 17654 18868 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_13 18889 19311 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_14 19311 19826 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_15 19823 20188 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_16 20185 20781 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_17 20778 21758 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_18 21751 22947 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_19 22940 23425 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_20 23415 24161 + 3.A.15.1.1
TC NZ_JAJWHX010000035.1 NZ_JAJWHX010000035.1_21 24158 24958 + 3.A.15.1.1
Gene ID: NZ_JAJWHX010000035.1_1
Type: TC
Location: 2 - 1192 (-)
Gene ID: NZ_JAJWHX010000035.1_2
Type: TC
Location: 1189 - 2079 (-)
Gene ID: NZ_JAJWHX010000035.1_3
Type: TC
Location: 2079 - 2876 (-)
Gene ID: NZ_JAJWHX010000035.1_4
Type: TC
Location: 2922 - 5135 (-)
Gene ID: NZ_JAJWHX010000035.1_5
Type: CAZyme
Location: 5370 - 7922 (-)
Gene ID: NZ_JAJWHX010000035.1_6
Type: TC
Location: 8507 - 8884 (+)
Gene ID: NZ_JAJWHX010000035.1_7
Type: pfam
Location: 8923 - 9486 (-)
Gene ID: NZ_JAJWHX010000035.1_8
Type: CAZyme
Location: 9743 - 13030 (-)
Gene ID: NZ_JAJWHX010000035.1_9
Type: TC
Location: 13337 - 14179 (+)
Gene ID: NZ_JAJWHX010000035.1_10
Type: TC
Location: 14189 - 16162 (+)
Gene ID: NZ_JAJWHX010000035.1_11
Type: TC
Location: 16159 - 17652 (+)
Gene ID: NZ_JAJWHX010000035.1_12
Type: TC
Location: 17654 - 18868 (+)
Gene ID: NZ_JAJWHX010000035.1_13
Type: TC
Location: 18889 - 19311 (+)
Gene ID: NZ_JAJWHX010000035.1_14
Type: TC
Location: 19311 - 19826 (+)
Gene ID: NZ_JAJWHX010000035.1_15
Type: TC
Location: 19823 - 20188 (+)
Gene ID: NZ_JAJWHX010000035.1_16
Type: TC
Location: 20185 - 20781 (+)
Gene ID: NZ_JAJWHX010000035.1_17
Type: TC
Location: 20778 - 21758 (+)
Gene ID: NZ_JAJWHX010000035.1_18
Type: TC
Location: 21751 - 22947 (+)
Gene ID: NZ_JAJWHX010000035.1_19
Type: TC
Location: 22940 - 23425 (+)
Gene ID: NZ_JAJWHX010000035.1_20
Type: TC
Location: 23415 - 24161 (+)
Gene ID: NZ_JAJWHX010000035.1_21
Type: TC
Location: 24158 - 24958 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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