dbCAN HGM

Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC24

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_27	27147	27887	-	CE14
TF	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_28	28015	29241	+	HTH_1 \| HTH_1
pfam	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_29	29238	30500	-	LigB \| LigA
TC	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_30	30514	31884	-	2.A.1.15.1
TF	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_31	32096	33040	-	LacI
TC	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_32	33331	33645	+	4.A.3.2.6
TC	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_33	33657	34979	+	4.A.3.2.6
TC	NZ_JAJWHX010000052.1	NZ_JAJWHX010000052.1_34	35077	35379	+	4.A.3.2.6

Gene ID: NZ_JAJWHX010000052.1_27
Type: CAZyme
Location: 27147 - 27887 (-)

Gene ID: NZ_JAJWHX010000052.1_28
Type: TF
Location: 28015 - 29241 (+)

Gene ID: NZ_JAJWHX010000052.1_29
Type: pfam
Location: 29238 - 30500 (-)

Gene ID: NZ_JAJWHX010000052.1_30
Type: TC
Location: 30514 - 31884 (-)

Gene ID: NZ_JAJWHX010000052.1_31
Type: TF
Location: 32096 - 33040 (-)

Gene ID: NZ_JAJWHX010000052.1_32
Type: TC
Location: 33331 - 33645 (+)

Gene ID: NZ_JAJWHX010000052.1_33
Type: TC
Location: 33657 - 34979 (+)

Gene ID: NZ_JAJWHX010000052.1_34
Type: TC
Location: 35077 - 35379 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
NZ_JAJWHX010000052.1_33	vegetarian > omnivore	1.55783	0.02460
NZ_JAJWHX010000052.1_34	vegetarian > omnivore	2.02862	0.02831