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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_2 1363 1950 - 9.B.29.3.1
TC NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_3 2103 2672 + 9.B.27.2.7
TC NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_4 2706 4145 - 1.B.17.3.10
pfam NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_5 4274 5008 + Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_6 5042 6436 - GH1
TC NZ_JAJWHX010000119.1 NZ_JAJWHX010000119.1_7 6452 8314 - 4.A.1.2.2
Gene ID: NZ_JAJWHX010000119.1_2
Type: TC
Location: 1363 - 1950 (-)
Gene ID: NZ_JAJWHX010000119.1_3
Type: TC
Location: 2103 - 2672 (+)
Gene ID: NZ_JAJWHX010000119.1_4
Type: TC
Location: 2706 - 4145 (-)
Gene ID: NZ_JAJWHX010000119.1_5
Type: pfam
Location: 4274 - 5008 (+)
Gene ID: NZ_JAJWHX010000119.1_6
Type: CAZyme
Location: 5042 - 6436 (-)
Gene ID: NZ_JAJWHX010000119.1_7
Type: TC
Location: 6452 - 8314 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
NZ_JAJWHX010000119.1_2 vegetarian > omnivore 1.13857 0.02831
NZ_JAJWHX010000119.1_2 vegetarian > vegan 2.26953 0.02392

🧭 Explore Read Mapping of CGC

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