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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_45 47664 48959 + 2.A.1.6.7
pfam NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_46 49010 49342 - YbfN
TC NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_47 49390 50793 - 1.B.25.1.13
pfam NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_48 51230 52897 - tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_49 53076 55025 - 4.A.1.1.2
pfam NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_50 55341 56141 + Glucosamine_iso
CAZyme NZ_JAJWHX010000004.1 NZ_JAJWHX010000004.1_51 56257 57405 + CE9
Gene ID: NZ_JAJWHX010000004.1_45
Type: TC
Location: 47664 - 48959 (+)
Gene ID: NZ_JAJWHX010000004.1_46
Type: pfam
Location: 49010 - 49342 (-)
Gene ID: NZ_JAJWHX010000004.1_47
Type: TC
Location: 49390 - 50793 (-)
Gene ID: NZ_JAJWHX010000004.1_48
Type: pfam
Location: 51230 - 52897 (-)
Gene ID: NZ_JAJWHX010000004.1_49
Type: TC
Location: 53076 - 55025 (-)
Gene ID: NZ_JAJWHX010000004.1_50
Type: pfam
Location: 55341 - 56141 (+)
Gene ID: NZ_JAJWHX010000004.1_51
Type: CAZyme
Location: 56257 - 57405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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