Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: GCF_021624045.1_ASM2162404v1_genomic
- Continent: Africa
- Source Study: Tamburini et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_37 | 40593 | 41417 | + | 9.B.104.1.1 |
| TF | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_38 | 41467 | 42225 | + | HTH_DeoR |
| TF | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_39 | 42241 | 44946 | - | GerE |
| CAZyme | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_40 | 45571 | 47961 | + | GT35 |
| CAZyme | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_41 | 47972 | 50065 | + | GH77 |
| TC | NZ_JAJWHX010000003.1 | NZ_JAJWHX010000003.1_42 | 50170 | 51486 | - | 2.A.8.1.4 |
Gene ID: NZ_JAJWHX010000003.1_37
Type: TC
Location: 40593 - 41417 (+)
Type: TC
Location: 40593 - 41417 (+)
Gene ID: NZ_JAJWHX010000003.1_38
Type: TF
Location: 41467 - 42225 (+)
Type: TF
Location: 41467 - 42225 (+)
Gene ID: NZ_JAJWHX010000003.1_39
Type: TF
Location: 42241 - 44946 (-)
Type: TF
Location: 42241 - 44946 (-)
Gene ID: NZ_JAJWHX010000003.1_40
Type: CAZyme
Location: 45571 - 47961 (+)
Type: CAZyme
Location: 45571 - 47961 (+)
Gene ID: NZ_JAJWHX010000003.1_41
Type: CAZyme
Location: 47972 - 50065 (+)
Type: CAZyme
Location: 47972 - 50065 (+)
Gene ID: NZ_JAJWHX010000003.1_42
Type: TC
Location: 50170 - 51486 (-)
Type: TC
Location: 50170 - 51486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasivariicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.