dbCAN Logo

Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_3 1211 2638 + 2.A.1.3.38
TC NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_4 2709 3953 + 1.A.23.4.5
TF NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_5 3957 4937 - LacI
NULL(UNKNOWN) NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_6 5169 5585 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_7 5594 6745 - GH179
pfam NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_8 6747 7769 - AP_endonuc_2
TC NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_9 7786 9027 - 2.A.1.10.4
TC NZ_JAJWHX010000137.1 NZ_JAJWHX010000137.1_10 9178 10554 - 2.A.3.1.1
Gene ID: NZ_JAJWHX010000137.1_3
Type: TC
Location: 1211 - 2638 (+)
Gene ID: NZ_JAJWHX010000137.1_4
Type: TC
Location: 2709 - 3953 (+)
Gene ID: NZ_JAJWHX010000137.1_5
Type: TF
Location: 3957 - 4937 (-)
Gene ID: NZ_JAJWHX010000137.1_6
Type:
Location: 5169 - 5585 (+)
Gene ID: NZ_JAJWHX010000137.1_7
Type: CAZyme
Location: 5594 - 6745 (-)
Gene ID: NZ_JAJWHX010000137.1_8
Type: pfam
Location: 6747 - 7769 (-)
Gene ID: NZ_JAJWHX010000137.1_9
Type: TC
Location: 7786 - 9027 (-)
Gene ID: NZ_JAJWHX010000137.1_10
Type: TC
Location: 9178 - 10554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
NZ_JAJWHX010000137.1_5 vegetarian > omnivore 2.55409 0.02460

🧭 Explore Read Mapping of CGC

← Back to Cluster List