Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: GCF_021624045.1_ASM2162404v1_genomic
- Continent: Africa
- Source Study: Tamburini et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_30 | 29460 | 30338 | - | 3.A.1.15.10 |
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_31 | 30346 | 31209 | - | 3.A.1.15.10 |
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_32 | 31206 | 31883 | - | 3.A.1.15.10 |
| NULL(UNKNOWN) | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_33 | 31880 | 31987 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_34 | 32530 | 33609 | - | GH103 |
| NULL(UNKNOWN) | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_35 | 33630 | 33731 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_36 | 33886 | 34449 | + | 4.A.4.1.1 |
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_37 | 34446 | 35417 | + | 4.A.4.1.1 |
| TC | NZ_JAJWHX010000043.1 | NZ_JAJWHX010000043.1_38 | 35431 | 35793 | + | 4.A.4.1.1 |
Gene ID: NZ_JAJWHX010000043.1_30
Type: TC
Location: 29460 - 30338 (-)
Type: TC
Location: 29460 - 30338 (-)
Gene ID: NZ_JAJWHX010000043.1_31
Type: TC
Location: 30346 - 31209 (-)
Type: TC
Location: 30346 - 31209 (-)
Gene ID: NZ_JAJWHX010000043.1_32
Type: TC
Location: 31206 - 31883 (-)
Type: TC
Location: 31206 - 31883 (-)
Gene ID: NZ_JAJWHX010000043.1_33
Type:
Location: 31880 - 31987 (-)
Type:
Location: 31880 - 31987 (-)
Gene ID: NZ_JAJWHX010000043.1_34
Type: CAZyme
Location: 32530 - 33609 (-)
Type: CAZyme
Location: 32530 - 33609 (-)
Gene ID: NZ_JAJWHX010000043.1_35
Type:
Location: 33630 - 33731 (-)
Type:
Location: 33630 - 33731 (-)
Gene ID: NZ_JAJWHX010000043.1_36
Type: TC
Location: 33886 - 34449 (+)
Type: TC
Location: 33886 - 34449 (+)
Gene ID: NZ_JAJWHX010000043.1_37
Type: TC
Location: 34446 - 35417 (+)
Type: TC
Location: 34446 - 35417 (+)
Gene ID: NZ_JAJWHX010000043.1_38
Type: TC
Location: 35431 - 35793 (+)
Type: TC
Location: 35431 - 35793 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasivariicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| NZ_JAJWHX010000043.1_30 | vegetarian > omnivore | 1.33386 | 0.02831 |