Cluster: GCA_021622465.1_ASM2162246v1_genomic_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: GCA_021622465.1_ASM2162246v1_genomic
- CGC Family ID: CGCFAM_00050
- Continent: Africa
- Source Study: Tamburini et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | JAJVSX010000045.1 | JAJVSX010000045.1_2 | 127 | 1047 | - | GT2 |
| pfam | JAJVSX010000045.1 | JAJVSX010000045.1_3 | 1052 | 2221 | - | Radical_SAM | SPASM |
| CAZyme | JAJVSX010000045.1 | JAJVSX010000045.1_4 | 2223 | 3428 | - | GT4 |
| CAZyme | JAJVSX010000045.1 | JAJVSX010000045.1_5 | 3442 | 4563 | - | GT4 |
| TC | JAJVSX010000045.1 | JAJVSX010000045.1_6 | 4566 | 5255 | - | 9.B.18.1.2 |
| pfam | JAJVSX010000045.1 | JAJVSX010000045.1_7 | 5366 | 6022 | - | CpsB_CapC |
| TC | JAJVSX010000045.1 | JAJVSX010000045.1_8 | 6019 | 7404 | - | 8.A.3.3.4 |
Gene ID: JAJVSX010000045.1_2
Type: CAZyme
Location: 127 - 1047 (-)
Type: CAZyme
Location: 127 - 1047 (-)
Gene ID: JAJVSX010000045.1_3
Type: pfam
Location: 1052 - 2221 (-)
Type: pfam
Location: 1052 - 2221 (-)
Gene ID: JAJVSX010000045.1_4
Type: CAZyme
Location: 2223 - 3428 (-)
Type: CAZyme
Location: 2223 - 3428 (-)
Gene ID: JAJVSX010000045.1_5
Type: CAZyme
Location: 3442 - 4563 (-)
Type: CAZyme
Location: 3442 - 4563 (-)
Gene ID: JAJVSX010000045.1_6
Type: TC
Location: 4566 - 5255 (-)
Type: TC
Location: 4566 - 5255 (-)
Gene ID: JAJVSX010000045.1_7
Type: pfam
Location: 5366 - 6022 (-)
Type: pfam
Location: 5366 - 6022 (-)
Gene ID: JAJVSX010000045.1_8
Type: TC
Location: 6019 - 7404 (-)
Type: TC
Location: 6019 - 7404 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Acholeplasmatales
Family
Anaeroplasmataceae
Genus
Anaeroplasma
Species
Anaeroplasma faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.