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Cluster: GCA_021622465.1_ASM2162246v1_genomic_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme JAJVSX010000014.1 JAJVSX010000014.1_5 7197 8885 + PL1
NULL(UNKNOWN) JAJVSX010000014.1 JAJVSX010000014.1_6 8952 9464 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme JAJVSX010000014.1 JAJVSX010000014.1_7 9561 10868 + GH28
STP JAJVSX010000014.1 JAJVSX010000014.1_8 10902 13442 + EAL | GGDEF
pfam JAJVSX010000014.1 JAJVSX010000014.1_9 13473 13934 + dCMP_cyt_deam_1 | MafB19-deam
TC JAJVSX010000014.1 JAJVSX010000014.1_10 14212 15021 + 3.A.1.25.4
TC JAJVSX010000014.1 JAJVSX010000014.1_11 14997 15854 + 3.A.1.26.7
TC JAJVSX010000014.1 JAJVSX010000014.1_12 15847 16821 + 3.A.1.25.4
pfam JAJVSX010000014.1 JAJVSX010000014.1_13 16814 17545 + PseudoU_synth_1 | PseudoU_synth_1
TC JAJVSX010000014.1 JAJVSX010000014.1_14 17561 19294 + 3.A.1.135.5
TC JAJVSX010000014.1 JAJVSX010000014.1_15 19275 21008 + 3.A.1.135.5
pfam JAJVSX010000014.1 JAJVSX010000014.1_16 21010 21852 + ATP_bind_3
TC JAJVSX010000014.1 JAJVSX010000014.1_17 21993 24068 + 3.A.1.122.14
Gene ID: JAJVSX010000014.1_5
Type: CAZyme
Location: 7197 - 8885 (+)
Gene ID: JAJVSX010000014.1_6
Type:
Location: 8952 - 9464 (-)
Gene ID: JAJVSX010000014.1_7
Type: CAZyme
Location: 9561 - 10868 (+)
Gene ID: JAJVSX010000014.1_8
Type: STP
Location: 10902 - 13442 (+)
Gene ID: JAJVSX010000014.1_9
Type: pfam
Location: 13473 - 13934 (+)
Gene ID: JAJVSX010000014.1_10
Type: TC
Location: 14212 - 15021 (+)
Gene ID: JAJVSX010000014.1_11
Type: TC
Location: 14997 - 15854 (+)
Gene ID: JAJVSX010000014.1_12
Type: TC
Location: 15847 - 16821 (+)
Gene ID: JAJVSX010000014.1_13
Type: pfam
Location: 16814 - 17545 (+)
Gene ID: JAJVSX010000014.1_14
Type: TC
Location: 17561 - 19294 (+)
Gene ID: JAJVSX010000014.1_15
Type: TC
Location: 19275 - 21008 (+)
Gene ID: JAJVSX010000014.1_16
Type: pfam
Location: 21010 - 21852 (+)
Gene ID: JAJVSX010000014.1_17
Type: TC
Location: 21993 - 24068 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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