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Cluster: FerrettiP_2018_SRR5274072_bin.2_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_2 923 1930 + 2.A.80.1.3
pfam FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_3 1971 2891 + Amidohydro_2
TC FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_4 2904 3920 + 2.A.80.1.3
pfam FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_5 3994 4680 + RraA-like
pfam FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_6 4677 5609 + 2-Hacid_dh | 2-Hacid_dh_C
TC FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_7 5697 6716 + 2.A.80.1.3
TC FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_8 6730 7728 + 2.A.80.1.3
TC FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_9 7746 8717 + 2.A.80.1.3
pfam FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_10 8714 9604 + Amidohydro_2
sulfatase FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_11 9625 10542 + S1_24
CAZyme FerrettiP_2018_SRR5274072_bin.2_k119_10516 FerrettiP_2018_SRR5274072_bin.2_k119_10516_12 10718 12919 + AA2
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_2
Type: TC
Location: 923 - 1930 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_3
Type: pfam
Location: 1971 - 2891 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_4
Type: TC
Location: 2904 - 3920 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_5
Type: pfam
Location: 3994 - 4680 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_6
Type: pfam
Location: 4677 - 5609 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_7
Type: TC
Location: 5697 - 6716 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_8
Type: TC
Location: 6730 - 7728 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_9
Type: TC
Location: 7746 - 8717 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_10
Type: pfam
Location: 8714 - 9604 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_11
Type: sulfatase
Location: 9625 - 10542 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_10516_12
Type: CAZyme
Location: 10718 - 12919 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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