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Cluster: FerrettiP_2018_SRR5274072_bin.2_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_4 4103 5053 - 2.A.6.4.1
TC FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_5 5146 7029 - 2.A.6.4.1
TC FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_6 7136 7408 - 3.A.5.1.1
pfam FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_7 7771 11340 - POR | TPP_enzyme_C | DUF6537
TF FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_8 11529 12011 + 0040266
CAZyme FerrettiP_2018_SRR5274072_bin.2_k119_31247 FerrettiP_2018_SRR5274072_bin.2_k119_31247_9 12092 13297 - GH102
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_4
Type: TC
Location: 4103 - 5053 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_5
Type: TC
Location: 5146 - 7029 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_6
Type: TC
Location: 7136 - 7408 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_7
Type: pfam
Location: 7771 - 11340 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_8
Type: TF
Location: 11529 - 12011 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_31247_9
Type: CAZyme
Location: 12092 - 13297 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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