dbCAN HGM

Cluster: FerrettiP_2018_SRR5274072_bin.2_CGC16

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	FerrettiP_2018_SRR5274072_bin.2_k119_28448	FerrettiP_2018_SRR5274072_bin.2_k119_28448_2	345	1718	+	GT30
TC	FerrettiP_2018_SRR5274072_bin.2_k119_28448	FerrettiP_2018_SRR5274072_bin.2_k119_28448_3	1774	3108	-	2.A.6.2.26
STP	FerrettiP_2018_SRR5274072_bin.2_k119_28448	FerrettiP_2018_SRR5274072_bin.2_k119_28448_4	3211	3552	-	Rhodanese
pfam	FerrettiP_2018_SRR5274072_bin.2_k119_28448	FerrettiP_2018_SRR5274072_bin.2_k119_28448_5	3586	4299	-	RrnaAD \| PCMT \| Ubie_methyltran \| Methyltransf_3 \| MTS \| Methyltransf_11 \| Methyltransf_12 \| Methyltransf_23 \| Methyltransf_25 \| Methyltransf_31
TC	FerrettiP_2018_SRR5274072_bin.2_k119_28448	FerrettiP_2018_SRR5274072_bin.2_k119_28448_6	4341	7523	-	2.A.6.3.3

Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_28448_2
Type: CAZyme
Location: 345 - 1718 (+)

Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_28448_3
Type: TC
Location: 1774 - 3108 (-)

Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_28448_4
Type: STP
Location: 3211 - 3552 (-)

Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_28448_5
Type: pfam
Location: 3586 - 4299 (-)

Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_28448_6
Type: TC
Location: 4341 - 7523 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.