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Cluster: FerrettiP_2018_SRR5274072_bin.2_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_8 7916 9028 + GH103
TC FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_9 9204 10196 + 3.A.1.105.17
TC FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_10 10193 10963 + 3.A.1.105.17
pfam FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_11 11024 12367 - Peripla_BP_5 | Peripla_BP_6
pfam FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_12 12460 12858 + HSP20
TC FerrettiP_2018_SRR5274072_bin.2_k119_24645 FerrettiP_2018_SRR5274072_bin.2_k119_24645_13 12987 13886 - 3.A.1.122.2
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_8
Type: CAZyme
Location: 7916 - 9028 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_9
Type: TC
Location: 9204 - 10196 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_10
Type: TC
Location: 10193 - 10963 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_11
Type: pfam
Location: 11024 - 12367 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_12
Type: pfam
Location: 12460 - 12858 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_24645_13
Type: TC
Location: 12987 - 13886 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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