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Cluster: FerrettiP_2018_SRR5274072_bin.2_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_1 2 1645 - 3.A.11.2.1
pfam FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_2 1782 2240 + Ribonuc_L-PSP | YjgF_endoribonc
TC FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_3 2361 4151 - 1.B.52.2.1
pfam FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_4 4407 6764 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C
CAZyme FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_5 6761 7615 - GH23
STP FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_6 7649 9631 - HATPase_c
TC FerrettiP_2018_SRR5274072_bin.2_k119_4593 FerrettiP_2018_SRR5274072_bin.2_k119_4593_7 9789 10979 + 2.A.1.11.2
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_1
Type: TC
Location: 2 - 1645 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_2
Type: pfam
Location: 1782 - 2240 (+)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_3
Type: TC
Location: 2361 - 4151 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_4
Type: pfam
Location: 4407 - 6764 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_5
Type: CAZyme
Location: 6761 - 7615 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_6
Type: STP
Location: 7649 - 9631 (-)
Gene ID: FerrettiP_2018_SRR5274072_bin.2_k119_4593_7
Type: TC
Location: 9789 - 10979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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