Cluster: FerrettiP_2018_SRR5274049_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: FerrettiP_2018_SRR5274049_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | FerrettiP_2018_SRR5274049_bin.5_k119_4469 | FerrettiP_2018_SRR5274049_bin.5_k119_4469_36 | 41791 | 43236 | - | GH1 |
| pfam | FerrettiP_2018_SRR5274049_bin.5_k119_4469 | FerrettiP_2018_SRR5274049_bin.5_k119_4469_37 | 43236 | 43583 | - | PTS_IIA |
| TC | FerrettiP_2018_SRR5274049_bin.5_k119_4469 | FerrettiP_2018_SRR5274049_bin.5_k119_4469_38 | 43669 | 44985 | - | 4.A.3.2.8 |
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_4469_36
Type: CAZyme
Location: 41791 - 43236 (-)
Type: CAZyme
Location: 41791 - 43236 (-)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_4469_37
Type: pfam
Location: 43236 - 43583 (-)
Type: pfam
Location: 43236 - 43583 (-)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_4469_38
Type: TC
Location: 43669 - 44985 (-)
Type: TC
Location: 43669 - 44985 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Lancefieldella
Species
Lancefieldella sp902373375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.