Cluster: FerrettiP_2018_SRR5274049_bin.5_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: FerrettiP_2018_SRR5274049_bin.5
- CGC Family ID: CGCFAM_00325
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | FerrettiP_2018_SRR5274049_bin.5_k119_3611 | FerrettiP_2018_SRR5274049_bin.5_k119_3611_1 | 19 | 975 | + | 3.A.1.5.38 |
| TC | FerrettiP_2018_SRR5274049_bin.5_k119_3611 | FerrettiP_2018_SRR5274049_bin.5_k119_3611_2 | 980 | 3019 | + | 3.A.1.5.35 |
| TC | FerrettiP_2018_SRR5274049_bin.5_k119_3611 | FerrettiP_2018_SRR5274049_bin.5_k119_3611_3 | 3020 | 3841 | + | 3.A.1.5.35 |
| CAZyme | FerrettiP_2018_SRR5274049_bin.5_k119_3611 | FerrettiP_2018_SRR5274049_bin.5_k119_3611_4 | 3909 | 4949 | + | CE7 |
| CAZyme | FerrettiP_2018_SRR5274049_bin.5_k119_3611 | FerrettiP_2018_SRR5274049_bin.5_k119_3611_5 | 4946 | 5932 | + | CE7 |
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_3611_1
Type: TC
Location: 19 - 975 (+)
Type: TC
Location: 19 - 975 (+)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_3611_2
Type: TC
Location: 980 - 3019 (+)
Type: TC
Location: 980 - 3019 (+)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_3611_3
Type: TC
Location: 3020 - 3841 (+)
Type: TC
Location: 3020 - 3841 (+)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_3611_4
Type: CAZyme
Location: 3909 - 4949 (+)
Type: CAZyme
Location: 3909 - 4949 (+)
Gene ID: FerrettiP_2018_SRR5274049_bin.5_k119_3611_5
Type: CAZyme
Location: 4946 - 5932 (+)
Type: CAZyme
Location: 4946 - 5932 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Lancefieldella
Species
Lancefieldella sp902373375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.