Cluster: FerrettiP_2018_SRR5274007_bin.1_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: FerrettiP_2018_SRR5274007_bin.1
- CGC Family ID: CGCFAM_03735
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | FerrettiP_2018_SRR5274007_bin.1_k119_10786 | FerrettiP_2018_SRR5274007_bin.1_k119_10786_3 | 1617 | 3077 | - | 2.A.3.1.8 |
| pfam | FerrettiP_2018_SRR5274007_bin.1_k119_10786 | FerrettiP_2018_SRR5274007_bin.1_k119_10786_4 | 3314 | 4162 | + | PHP |
| TC | FerrettiP_2018_SRR5274007_bin.1_k119_10786 | FerrettiP_2018_SRR5274007_bin.1_k119_10786_5 | 4159 | 4788 | + | 2.A.95.1.5 |
| NULL(UNKNOWN) | FerrettiP_2018_SRR5274007_bin.1_k119_10786 | FerrettiP_2018_SRR5274007_bin.1_k119_10786_6 | 5205 | 6704 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | FerrettiP_2018_SRR5274007_bin.1_k119_10786 | FerrettiP_2018_SRR5274007_bin.1_k119_10786_7 | 7093 | 9009 | + | GT35 |
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_10786_3
Type: TC
Location: 1617 - 3077 (-)
Type: TC
Location: 1617 - 3077 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_10786_4
Type: pfam
Location: 3314 - 4162 (+)
Type: pfam
Location: 3314 - 4162 (+)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_10786_5
Type: TC
Location: 4159 - 4788 (+)
Type: TC
Location: 4159 - 4788 (+)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_10786_6
Type:
Location: 5205 - 6704 (-)
Type:
Location: 5205 - 6704 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_10786_7
Type: CAZyme
Location: 7093 - 9009 (+)
Type: CAZyme
Location: 7093 - 9009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp902373435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.