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Cluster: FerrettiP_2018_SRR5274007_bin.1_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_2 492 2642 + GH77
TC FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_3 2715 3188 - 4.A.1.2.6
TC FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_4 3185 3415 - 4.A.1.1.1
TC FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_5 3522 4787 - 2.A.1.21.21
pfam FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_6 4784 5692 - S6PP | Hydrolase_3
CAZyme FerrettiP_2018_SRR5274007_bin.1_k119_6675 FerrettiP_2018_SRR5274007_bin.1_k119_6675_7 5815 7599 + GH3
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_2
Type: CAZyme
Location: 492 - 2642 (+)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_3
Type: TC
Location: 2715 - 3188 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_4
Type: TC
Location: 3185 - 3415 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_5
Type: TC
Location: 3522 - 4787 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_6
Type: pfam
Location: 4784 - 5692 (-)
Gene ID: FerrettiP_2018_SRR5274007_bin.1_k119_6675_7
Type: CAZyme
Location: 5815 - 7599 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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