Cluster: DianaHT_2018_SRR6795046_bin.8_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795046_bin.8
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_22 | 19714 | 21117 | + | AA4 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_23 | 21395 | 22615 | + | GTP_cyclohydro2 | DHBP_synthase |
| TF | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_24 | 22847 | 23515 | - | 0038753 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_25 | 23606 | 24964 | - | 2.A.66.1.25 |
| TF | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_26 | 25168 | 25608 | - | MarR |
| sulfatase | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_27 | 25733 | 26680 | - | S1_16 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_28 | 26807 | 27652 | - | 3.D.6.1.3 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_29 | 27680 | 28252 | - | 3.D.6.1.4 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_30 | 28252 | 28875 | - | 3.D.6.1.2 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_31 | 28878 | 29429 | - | FMN_bind |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_32 | 29431 | 30429 | - | 3.D.6.1.2 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_7254 | DianaHT_2018_SRR6795046_bin.8_k141_7254_33 | 30459 | 31805 | - | 3.D.6.1.2 |
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_22
Type: CAZyme
Location: 19714 - 21117 (+)
Type: CAZyme
Location: 19714 - 21117 (+)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_23
Type: pfam
Location: 21395 - 22615 (+)
Type: pfam
Location: 21395 - 22615 (+)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_24
Type: TF
Location: 22847 - 23515 (-)
Type: TF
Location: 22847 - 23515 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_25
Type: TC
Location: 23606 - 24964 (-)
Type: TC
Location: 23606 - 24964 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_26
Type: TF
Location: 25168 - 25608 (-)
Type: TF
Location: 25168 - 25608 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_27
Type: sulfatase
Location: 25733 - 26680 (-)
Type: sulfatase
Location: 25733 - 26680 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_28
Type: TC
Location: 26807 - 27652 (-)
Type: TC
Location: 26807 - 27652 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_29
Type: TC
Location: 27680 - 28252 (-)
Type: TC
Location: 27680 - 28252 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_30
Type: TC
Location: 28252 - 28875 (-)
Type: TC
Location: 28252 - 28875 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_31
Type: pfam
Location: 28878 - 29429 (-)
Type: pfam
Location: 28878 - 29429 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_32
Type: TC
Location: 29431 - 30429 (-)
Type: TC
Location: 29431 - 30429 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_7254_33
Type: TC
Location: 30459 - 31805 (-)
Type: TC
Location: 30459 - 31805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900540735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.