Cluster: DianaHT_2018_SRR6795046_bin.8_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795046_bin.8
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795046_bin.8_k141_20064 | DianaHT_2018_SRR6795046_bin.8_k141_20064_24 | 14428 | 15105 | + | 1.B.6.1.7 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_20064 | DianaHT_2018_SRR6795046_bin.8_k141_20064_25 | 15212 | 16048 | - | Aldo_ket_red |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_20064 | DianaHT_2018_SRR6795046_bin.8_k141_20064_26 | 16085 | 16879 | - | LGT |
| CAZyme | DianaHT_2018_SRR6795046_bin.8_k141_20064 | DianaHT_2018_SRR6795046_bin.8_k141_20064_27 | 17003 | 18745 | + | GH18 |
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_20064_24
Type: TC
Location: 14428 - 15105 (+)
Type: TC
Location: 14428 - 15105 (+)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_20064_25
Type: pfam
Location: 15212 - 16048 (-)
Type: pfam
Location: 15212 - 16048 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_20064_26
Type: pfam
Location: 16085 - 16879 (-)
Type: pfam
Location: 16085 - 16879 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_20064_27
Type: CAZyme
Location: 17003 - 18745 (+)
Type: CAZyme
Location: 17003 - 18745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900540735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.