Cluster: DianaHT_2018_SRR6795046_bin.8_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795046_bin.8
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_27 | 22841 | 25999 | - | 2.A.6.2.22 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_28 | 26011 | 27180 | - | 2.A.6.2.29 |
| STP | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_29 | 27185 | 27760 | - | TetR_N |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_30 | 27884 | 28390 | - | 3.A.1.26.1 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_31 | 28383 | 29195 | - | HK |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_32 | 29199 | 29666 | - | DUF386 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_33 | 29680 | 30621 | - | 3.A.5.1.1 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_34 | 30625 | 34179 | - | SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23 |
| TC | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_35 | 34391 | 36025 | + | 3.A.18.1.1 |
| CAZyme | DianaHT_2018_SRR6795046_bin.8_k141_16870 | DianaHT_2018_SRR6795046_bin.8_k141_16870_36 | 36088 | 36939 | - | CE4 |
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_27
Type: TC
Location: 22841 - 25999 (-)
Type: TC
Location: 22841 - 25999 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_28
Type: TC
Location: 26011 - 27180 (-)
Type: TC
Location: 26011 - 27180 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_29
Type: STP
Location: 27185 - 27760 (-)
Type: STP
Location: 27185 - 27760 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_30
Type: TC
Location: 27884 - 28390 (-)
Type: TC
Location: 27884 - 28390 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_31
Type: pfam
Location: 28383 - 29195 (-)
Type: pfam
Location: 28383 - 29195 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_32
Type: pfam
Location: 29199 - 29666 (-)
Type: pfam
Location: 29199 - 29666 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_33
Type: TC
Location: 29680 - 30621 (-)
Type: TC
Location: 29680 - 30621 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_34
Type: pfam
Location: 30625 - 34179 (-)
Type: pfam
Location: 30625 - 34179 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_35
Type: TC
Location: 34391 - 36025 (+)
Type: TC
Location: 34391 - 36025 (+)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_16870_36
Type: CAZyme
Location: 36088 - 36939 (-)
Type: CAZyme
Location: 36088 - 36939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900540735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.