Cluster: DianaHT_2018_SRR6795046_bin.8_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795046_bin.8
- CGC Family ID: CGCFAM_05863
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795046_bin.8_k141_8231 | DianaHT_2018_SRR6795046_bin.8_k141_8231_3 | 509 | 3943 | - | 3.B.1.1.1 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_8231 | DianaHT_2018_SRR6795046_bin.8_k141_8231_4 | 4149 | 5582 | - | Lyase_1 | ASL_C2 |
| pfam | DianaHT_2018_SRR6795046_bin.8_k141_8231 | DianaHT_2018_SRR6795046_bin.8_k141_8231_5 | 5599 | 6888 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | DianaHT_2018_SRR6795046_bin.8_k141_8231 | DianaHT_2018_SRR6795046_bin.8_k141_8231_6 | 7075 | 7866 | + | GT51 |
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_8231_3
Type: TC
Location: 509 - 3943 (-)
Type: TC
Location: 509 - 3943 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_8231_4
Type: pfam
Location: 4149 - 5582 (-)
Type: pfam
Location: 4149 - 5582 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_8231_5
Type: pfam
Location: 5599 - 6888 (-)
Type: pfam
Location: 5599 - 6888 (-)
Gene ID: DianaHT_2018_SRR6795046_bin.8_k141_8231_6
Type: CAZyme
Location: 7075 - 7866 (+)
Type: CAZyme
Location: 7075 - 7866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900540735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.