Cluster: DianaHT_2018_SRR6795027_bin.3_CGC97
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate: pectin/galactan
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00031
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_203 | 256248 | 258848 | + | GH147 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_204 | 258876 | 261845 | + | 1.B.14.6.1 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_205 | 261875 | 263449 | + | 8.A.46.1.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_206 | 263461 | 265173 | + | SusE | DUF5111 | DUF5114 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_207 | 265196 | 266953 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_208 | 267002 | 268066 | + | GH53 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_209 | 268076 | 270547 | + | GH2 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_210 | 270539 | 271723 | - | AAA |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_211 | 271893 | 273473 | - | PDDEXK_9 | AAA-ATPase_like |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_212 | 274835 | 277837 | + | 1.B.14.6.1 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_213 | 277856 | 279517 | + | 8.A.46.1.5 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_203
Type: CAZyme
Location: 256248 - 258848 (+)
Type: CAZyme
Location: 256248 - 258848 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_204
Type: TC
Location: 258876 - 261845 (+)
Type: TC
Location: 258876 - 261845 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_205
Type: TC
Location: 261875 - 263449 (+)
Type: TC
Location: 261875 - 263449 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_206
Type: pfam
Location: 263461 - 265173 (+)
Type: pfam
Location: 263461 - 265173 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_207
Type:
Location: 265196 - 266953 (+)
Type:
Location: 265196 - 266953 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_208
Type: CAZyme
Location: 267002 - 268066 (+)
Type: CAZyme
Location: 267002 - 268066 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_209
Type: CAZyme
Location: 268076 - 270547 (+)
Type: CAZyme
Location: 268076 - 270547 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_210
Type: STP
Location: 270539 - 271723 (-)
Type: STP
Location: 270539 - 271723 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_211
Type: pfam
Location: 271893 - 273473 (-)
Type: pfam
Location: 271893 - 273473 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_212
Type: TC
Location: 274835 - 277837 (+)
Type: TC
Location: 274835 - 277837 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_213
Type: TC
Location: 277856 - 279517 (+)
Type: TC
Location: 277856 - 279517 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.