Cluster: DianaHT_2018_SRR6795027_bin.3_CGC94
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_07740
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_29 | 38214 | 39473 | + | 2.A.1.7.11 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_30 | 39485 | 41206 | + | GH18 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_31 | 41368 | 42450 | - | GT4 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_32 | 42625 | 42870 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_33 | 42833 | 43924 | - | GT4 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_34 | 43921 | 45024 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_35 | 45030 | 46265 | - | GT4 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_36 | 46623 | 47951 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_37 | 47957 | 48925 | - | GT2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_38 | 49396 | 50250 | - | GT2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_39 | 50266 | 51393 | - | EpsG |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_12252 | DianaHT_2018_SRR6795027_bin.3_k141_12252_40 | 51565 | 53037 | - | 2.A.66.2.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_29
Type: TC
Location: 38214 - 39473 (+)
Type: TC
Location: 38214 - 39473 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_30
Type: CAZyme
Location: 39485 - 41206 (+)
Type: CAZyme
Location: 39485 - 41206 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_31
Type: CAZyme
Location: 41368 - 42450 (-)
Type: CAZyme
Location: 41368 - 42450 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_32
Type:
Location: 42625 - 42870 (-)
Type:
Location: 42625 - 42870 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_33
Type: CAZyme
Location: 42833 - 43924 (-)
Type: CAZyme
Location: 42833 - 43924 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_34
Type:
Location: 43921 - 45024 (-)
Type:
Location: 43921 - 45024 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_35
Type: CAZyme
Location: 45030 - 46265 (-)
Type: CAZyme
Location: 45030 - 46265 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_36
Type:
Location: 46623 - 47951 (-)
Type:
Location: 46623 - 47951 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_37
Type: CAZyme
Location: 47957 - 48925 (-)
Type: CAZyme
Location: 47957 - 48925 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_38
Type: CAZyme
Location: 49396 - 50250 (-)
Type: CAZyme
Location: 49396 - 50250 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_39
Type: pfam
Location: 50266 - 51393 (-)
Type: pfam
Location: 50266 - 51393 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_12252_40
Type: TC
Location: 51565 - 53037 (-)
Type: TC
Location: 51565 - 53037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_12252_29 | vegan > omnivore | 1.14674 | 0.00974 |