Cluster: DianaHT_2018_SRR6795027_bin.3_CGC90
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_43 | 81045 | 83492 | - | GH95 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_44 | 83763 | 84761 | + | PDDEXK_2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_45 | 85415 | 88729 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_46 | 88746 | 90596 | + | SusD_RagB | SusD-like_3 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_47 | 90639 | 92513 | + | DUF5006 | DUF5014 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_48 | 92621 | 94918 | + | GH20 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_49 | 94949 | 96076 | + | DUF5009 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_50 | 96106 | 98985 | + | GH36 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_51 | 99610 | 99936 | - | DUF4143 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_11361 | DianaHT_2018_SRR6795027_bin.3_k141_11361_52 | 100009 | 101361 | - | 2.A.1.4.6 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_43
Type: CAZyme
Location: 81045 - 83492 (-)
Type: CAZyme
Location: 81045 - 83492 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_44
Type: pfam
Location: 83763 - 84761 (+)
Type: pfam
Location: 83763 - 84761 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_45
Type: TC
Location: 85415 - 88729 (+)
Type: TC
Location: 85415 - 88729 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_46
Type: pfam
Location: 88746 - 90596 (+)
Type: pfam
Location: 88746 - 90596 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_47
Type: pfam
Location: 90639 - 92513 (+)
Type: pfam
Location: 90639 - 92513 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_48
Type: CAZyme
Location: 92621 - 94918 (+)
Type: CAZyme
Location: 92621 - 94918 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_49
Type: pfam
Location: 94949 - 96076 (+)
Type: pfam
Location: 94949 - 96076 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_50
Type: CAZyme
Location: 96106 - 98985 (+)
Type: CAZyme
Location: 96106 - 98985 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_51
Type: pfam
Location: 99610 - 99936 (-)
Type: pfam
Location: 99610 - 99936 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_11361_52
Type: TC
Location: 100009 - 101361 (-)
Type: TC
Location: 100009 - 101361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_11361_44 | vegan > omnivore | 1.16222 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_11361_52 | vegan > omnivore | 1.19760 | 0.00989 |
| DianaHT_2018_SRR6795027_bin.3_k141_11361_52 | vegetarian > omnivore | 1.61897 | 0.00085 |