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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_106 131790 133850 + 9.B.14.3.1
pfam DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_107 134087 134593 - Flavodoxin_1 | Flavodoxin_5
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_108 134590 134727 - NULL(UNKNOWN)
[View Structural Homologs]
TC DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_109 134755 135969 - 2.A.1.35.1
STP DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_110 136021 138495 - GAF | HATPase_c | HisKA
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_111 138816 142103 + GH106
pfam DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_112 142756 143610 + PDDEXK_2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_113 143802 145340 + CE20
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_114 145464 147674 + GH139
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_115 147842 150475 + GH2
TF DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_116 150594 154982 + HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_117 155041 156723 + PL1_2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_9925 DianaHT_2018_SRR6795027_bin.3_k141_9925_118 156754 159849 + PL29
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_106
Type: TC
Location: 131790 - 133850 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_107
Type: pfam
Location: 134087 - 134593 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_108
Type:
Location: 134590 - 134727 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_109
Type: TC
Location: 134755 - 135969 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_110
Type: STP
Location: 136021 - 138495 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_111
Type: CAZyme
Location: 138816 - 142103 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_112
Type: pfam
Location: 142756 - 143610 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_113
Type: CAZyme
Location: 143802 - 145340 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_114
Type: CAZyme
Location: 145464 - 147674 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_115
Type: CAZyme
Location: 147842 - 150475 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_116
Type: TF
Location: 150594 - 154982 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_117
Type: CAZyme
Location: 155041 - 156723 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_118
Type: CAZyme
Location: 156754 - 159849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_9925_108 vegan > omnivore 13.98482 0.00795
DianaHT_2018_SRR6795027_bin.3_k141_9925_108 vegetarian > omnivore 14.29706 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_9925_109 vegetarian > omnivore 1.10123 0.00085

🧭 Explore Read Mapping of CGC

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