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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_108 123715 125718 - 1.B.6.1.1
TC DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_109 125854 128067 - 3.A.7.7.1
TF DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_110 128574 132626 + HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_111 132939 135419 + PL15
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_112 135471 137972 + PL15
TC DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_113 138015 141134 + 1.B.14.6.1
pfam DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_114 141151 142839 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_115 142852 143427 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_116 143555 145561 + PL12_2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_117 145575 146882 + GH88
pfam DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_118 147086 147523 + DUF6078
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_119 147852 151217 - CBM32
STP DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_120 151442 153589 - B12-binding
pfam DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_121 153676 155538 - MM_CoA_mutase
TC DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_122 155894 157555 + 2.A.81.1.2
pfam DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_123 157640 158266 - Cytidylate_kin2
TC DianaHT_2018_SRR6795027_bin.3_k141_7063 DianaHT_2018_SRR6795027_bin.3_k141_7063_124 158350 159702 - 2.A.66.1.32
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_108
Type: TC
Location: 123715 - 125718 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_109
Type: TC
Location: 125854 - 128067 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_110
Type: TF
Location: 128574 - 132626 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_111
Type: CAZyme
Location: 132939 - 135419 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_112
Type: CAZyme
Location: 135471 - 137972 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_113
Type: TC
Location: 138015 - 141134 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_114
Type: pfam
Location: 141151 - 142839 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_115
Type:
Location: 142852 - 143427 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_116
Type: CAZyme
Location: 143555 - 145561 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_117
Type: CAZyme
Location: 145575 - 146882 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_118
Type: pfam
Location: 147086 - 147523 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_119
Type: CAZyme
Location: 147852 - 151217 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_120
Type: STP
Location: 151442 - 153589 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_121
Type: pfam
Location: 153676 - 155538 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_122
Type: TC
Location: 155894 - 157555 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_123
Type: pfam
Location: 157640 - 158266 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_7063_124
Type: TC
Location: 158350 - 159702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_7063_108 vegan > omnivore 2.14617 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_7063_108 vegetarian > omnivore 2.28809 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_7063_118 vegetarian > omnivore 1.51538 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_7063_118 vegetarian > vegan 13.19816 0.01693
DianaHT_2018_SRR6795027_bin.3_k141_7063_123 vegan > omnivore 2.33958 0.00688
DianaHT_2018_SRR6795027_bin.3_k141_7063_123 vegetarian > omnivore 2.53939 0.00085

🧭 Explore Read Mapping of CGC

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