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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_110 158636 159856 - CE15
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_111 160316 160453 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_112 160538 162259 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_113 162483 163817 - GH144
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_114 163957 166314 - GH3
pfam DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_115 166611 168131 - SusD_RagB | SusD-like_3
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_116 168177 171215 - 1.B.14.6.1
TF DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_117 171511 172539 + LacI
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_118 172664 173635 + 2.A.28.2.4
pfam DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_119 173637 174731 + APH | Fructosamin_kin
pfam DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_120 174771 175511 + HpcH_HpaI
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_121 175545 176822 + GH33
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_122 176915 180142 + 1.B.14.6.1
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_123 180189 181832 + 8.A.46.1.6
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_110
Type: CAZyme
Location: 158636 - 159856 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_111
Type:
Location: 160316 - 160453 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_112
Type:
Location: 160538 - 162259 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_113
Type: CAZyme
Location: 162483 - 163817 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_114
Type: CAZyme
Location: 163957 - 166314 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_115
Type: pfam
Location: 166611 - 168131 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_116
Type: TC
Location: 168177 - 171215 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_117
Type: TF
Location: 171511 - 172539 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_118
Type: TC
Location: 172664 - 173635 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_119
Type: pfam
Location: 173637 - 174731 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_120
Type: pfam
Location: 174771 - 175511 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_121
Type: CAZyme
Location: 175545 - 176822 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_122
Type: TC
Location: 176915 - 180142 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_123
Type: TC
Location: 180189 - 181832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_6819_110 vegan > omnivore 1.59186 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_6819_110 vegetarian > omnivore 2.67304 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_110 vegetarian > vegan 1.08118 0.01693

🧭 Explore Read Mapping of CGC

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