Cluster: DianaHT_2018_SRR6795027_bin.3_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_05254
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_105 | 119929 | 122322 | - | 1.B.14.6.5 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_106 | 122379 | 122801 | - | ACT_3 | ACT_7 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_107 | 122966 | 124570 | - | 3.A.1.120.6 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_108 | 124936 | 127065 | + | GAF | HATPase_c | HisKA | Response_reg |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_109 | 127078 | 127557 | - | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_1200 | DianaHT_2018_SRR6795027_bin.3_k141_1200_110 | 127656 | 128582 | + | GH73 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_105
Type: TC
Location: 119929 - 122322 (-)
Type: TC
Location: 119929 - 122322 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_106
Type: pfam
Location: 122379 - 122801 (-)
Type: pfam
Location: 122379 - 122801 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_107
Type: TC
Location: 122966 - 124570 (-)
Type: TC
Location: 122966 - 124570 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_108
Type: STP
Location: 124936 - 127065 (+)
Type: STP
Location: 124936 - 127065 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_109
Type: pfam
Location: 127078 - 127557 (-)
Type: pfam
Location: 127078 - 127557 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_1200_110
Type: CAZyme
Location: 127656 - 128582 (+)
Type: CAZyme
Location: 127656 - 128582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_1200_105 | vegan > omnivore | 1.58327 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_1200_105 | vegetarian > omnivore | 2.41868 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_1200_106 | vegan > omnivore | 1.91315 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_1200_106 | vegetarian > omnivore | 2.26418 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_1200_107 | vegetarian > omnivore | 1.18395 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_1200_108 | vegetarian > omnivore | 1.05346 | 0.00085 |