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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_74 104693 107944 + 1.B.14.6.1
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_75 107961 109613 + 8.A.46.1.6
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_76 109631 111286 + GH28
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_77 111293 112288 + CE8
TF DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_78 112320 116705 + HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_79 116797 118395 + GH28
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_74
Type: TC
Location: 104693 - 107944 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_75
Type: TC
Location: 107961 - 109613 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_76
Type: CAZyme
Location: 109631 - 111286 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_77
Type: CAZyme
Location: 111293 - 112288 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_78
Type: TF
Location: 112320 - 116705 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_79
Type: CAZyme
Location: 116797 - 118395 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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