Cluster: DianaHT_2018_SRR6795027_bin.3_CGC57
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate: pectin/host glycan
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00110
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_55 | 69204 | 71882 | + | GH2 |
| sulfatase | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_56 | 72032 | 73600 | + | S1_20 |
| TF | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_57 | 74307 | 78203 | - | HTH_AraC |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_58 | 78474 | 81698 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_59 | 81727 | 83550 | + | SusD_RagB | SusD-like_3 |
| sulfatase | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_60 | 83783 | 85366 | + | S1_11 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_61 | 85393 | 87708 | + | GH20 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_62 | 87721 | 90798 | + | GH2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_63 | 90824 | 92695 | + | CBM32 | GH29 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_64 | 92700 | 95120 | + | GH16_3 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_55
Type: CAZyme
Location: 69204 - 71882 (+)
Type: CAZyme
Location: 69204 - 71882 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_56
Type: sulfatase
Location: 72032 - 73600 (+)
Type: sulfatase
Location: 72032 - 73600 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_57
Type: TF
Location: 74307 - 78203 (-)
Type: TF
Location: 74307 - 78203 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_58
Type: TC
Location: 78474 - 81698 (+)
Type: TC
Location: 78474 - 81698 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_59
Type: pfam
Location: 81727 - 83550 (+)
Type: pfam
Location: 81727 - 83550 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_60
Type: sulfatase
Location: 83783 - 85366 (+)
Type: sulfatase
Location: 83783 - 85366 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_61
Type: CAZyme
Location: 85393 - 87708 (+)
Type: CAZyme
Location: 85393 - 87708 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_62
Type: CAZyme
Location: 87721 - 90798 (+)
Type: CAZyme
Location: 87721 - 90798 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_63
Type: CAZyme
Location: 90824 - 92695 (+)
Type: CAZyme
Location: 90824 - 92695 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_64
Type: CAZyme
Location: 92700 - 95120 (+)
Type: CAZyme
Location: 92700 - 95120 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_6819_61 | vegetarian > omnivore | 1.70947 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_6819_61 | vegetarian > vegan | 2.57138 | 0.01693 |
| DianaHT_2018_SRR6795027_bin.3_k141_6819_63 | vegetarian > vegan | 1.63299 | 0.01693 |
| DianaHT_2018_SRR6795027_bin.3_k141_6819_64 | vegetarian > omnivore | 1.75542 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_6819_64 | vegetarian > vegan | 2.88973 | 0.01693 |