Cluster: DianaHT_2018_SRR6795027_bin.3_CGC55
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_18 | 18872 | 19864 | - | 9.B.106.3.1 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_19 | 19880 | 21430 | - | 1.I.1.1.3 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_20 | 21452 | 22231 | - | FHA |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_21 | 23185 | 25113 | - | GH63 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_22 | 25140 | 28292 | - | GH2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_23 | 28321 | 28926 | - | 2.A.124.1.2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_24 | 28923 | 29201 | - | 2.A.124.1.2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_25 | 29310 | 30860 | - | SusD_RagB | SusD-like_3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6819 | DianaHT_2018_SRR6795027_bin.3_k141_6819_26 | 30882 | 34058 | - | 1.B.14.6.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_18
Type: TC
Location: 18872 - 19864 (-)
Type: TC
Location: 18872 - 19864 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_19
Type: TC
Location: 19880 - 21430 (-)
Type: TC
Location: 19880 - 21430 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_20
Type: STP
Location: 21452 - 22231 (-)
Type: STP
Location: 21452 - 22231 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_21
Type: CAZyme
Location: 23185 - 25113 (-)
Type: CAZyme
Location: 23185 - 25113 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_22
Type: CAZyme
Location: 25140 - 28292 (-)
Type: CAZyme
Location: 25140 - 28292 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_23
Type: TC
Location: 28321 - 28926 (-)
Type: TC
Location: 28321 - 28926 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_24
Type: TC
Location: 28923 - 29201 (-)
Type: TC
Location: 28923 - 29201 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_25
Type: pfam
Location: 29310 - 30860 (-)
Type: pfam
Location: 29310 - 30860 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_26
Type: TC
Location: 30882 - 34058 (-)
Type: TC
Location: 30882 - 34058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.