Cluster: DianaHT_2018_SRR6795027_bin.3_CGC52
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_103 | 125895 | 127568 | + | 9.B.174.1.1 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_104 | 127698 | 130535 | + | Y_Y_Y |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_105 | 130706 | 132997 | + | GH3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_106 | 133437 | 136409 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_107 | 136442 | 137959 | + | SusD_RagB | SusD-like_3 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_108 | 137977 | 138810 | + | Laminin_G_3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_109 | 138816 | 140474 | + | GH144 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_110 | 140488 | 141795 | + | GH144 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_111 | 141808 | 142662 | + | Exo_endo_phos |
| sulfatase | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_112 | 142686 | 144254 | + | S1_11 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6559 | DianaHT_2018_SRR6795027_bin.3_k141_6559_113 | 144278 | 146011 | + | CBM32 | GH43_28 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_103
Type: TC
Location: 125895 - 127568 (+)
Type: TC
Location: 125895 - 127568 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_104
Type: STP
Location: 127698 - 130535 (+)
Type: STP
Location: 127698 - 130535 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_105
Type: CAZyme
Location: 130706 - 132997 (+)
Type: CAZyme
Location: 130706 - 132997 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_106
Type: TC
Location: 133437 - 136409 (+)
Type: TC
Location: 133437 - 136409 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_107
Type: pfam
Location: 136442 - 137959 (+)
Type: pfam
Location: 136442 - 137959 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_108
Type: pfam
Location: 137977 - 138810 (+)
Type: pfam
Location: 137977 - 138810 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_109
Type: CAZyme
Location: 138816 - 140474 (+)
Type: CAZyme
Location: 138816 - 140474 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_110
Type: CAZyme
Location: 140488 - 141795 (+)
Type: CAZyme
Location: 140488 - 141795 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_111
Type: pfam
Location: 141808 - 142662 (+)
Type: pfam
Location: 141808 - 142662 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_112
Type: sulfatase
Location: 142686 - 144254 (+)
Type: sulfatase
Location: 142686 - 144254 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6559_113
Type: CAZyme
Location: 144278 - 146011 (+)
Type: CAZyme
Location: 144278 - 146011 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.