Cluster: DianaHT_2018_SRR6795027_bin.3_CGC50
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_23 | 25121 | 28306 | - | GH2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_24 | 28456 | 29913 | - | Laminin_G_3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_25 | 29938 | 31680 | - | 8.A.46.1.3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_26 | 31692 | 34883 | - | 1.B.14.6.1 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_27 | 35187 | 36428 | + | GH154 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_28 | 36463 | 37884 | + | Alk_phosphatase | Alk_phosphatase |
| TF | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_29 | 37930 | 41946 | - | HTH_AraC | HTH_AraC |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_6398 | DianaHT_2018_SRR6795027_bin.3_k141_6398_30 | 42124 | 44274 | - | CE1 | GH10 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_23
Type: CAZyme
Location: 25121 - 28306 (-)
Type: CAZyme
Location: 25121 - 28306 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_24
Type: pfam
Location: 28456 - 29913 (-)
Type: pfam
Location: 28456 - 29913 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_25
Type: TC
Location: 29938 - 31680 (-)
Type: TC
Location: 29938 - 31680 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_26
Type: TC
Location: 31692 - 34883 (-)
Type: TC
Location: 31692 - 34883 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_27
Type: CAZyme
Location: 35187 - 36428 (+)
Type: CAZyme
Location: 35187 - 36428 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_28
Type: pfam
Location: 36463 - 37884 (+)
Type: pfam
Location: 36463 - 37884 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_29
Type: TF
Location: 37930 - 41946 (-)
Type: TF
Location: 37930 - 41946 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6398_30
Type: CAZyme
Location: 42124 - 44274 (-)
Type: CAZyme
Location: 42124 - 44274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.