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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_83 135682 137004 + 2.A.1.1.3
TC DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_84 137154 140309 + 1.B.14.6.1
pfam DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_85 140338 142233 + SusD_RagB | SusD-like_3
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_86 142273 144735 + GH3
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_87 144770 146440 + GH32
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_955 DianaHT_2018_SRR6795027_bin.3_k141_955_88 146468 148018 + GH32
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_83
Type: TC
Location: 135682 - 137004 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_84
Type: TC
Location: 137154 - 140309 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_85
Type: pfam
Location: 140338 - 142233 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_86
Type: CAZyme
Location: 142273 - 144735 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_87
Type: CAZyme
Location: 144770 - 146440 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_955_88
Type: CAZyme
Location: 146468 - 148018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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