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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_73 84712 86418 + 3.A.3.7.2
TC DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_74 86438 88486 + 3.A.3.7.2
TC DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_75 88501 89073 + 3.A.3.7.2
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_76 89311 90060 + NULL(UNKNOWN)
[View Structural Homologs]
pfam DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_77 90285 91409 + KdpD
TC DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_78 91431 92870 + 2.A.21.9.1
peptidase DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_79 92919 95168 - S09.UPB
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_80 95182 97587 - GH127
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_81 97610 100012 - CBM32 | GH43_34
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6306 DianaHT_2018_SRR6795027_bin.3_k141_6306_82 100080 102812 - GH97
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_73
Type: TC
Location: 84712 - 86418 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_74
Type: TC
Location: 86438 - 88486 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_75
Type: TC
Location: 88501 - 89073 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_76
Type:
Location: 89311 - 90060 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_77
Type: pfam
Location: 90285 - 91409 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_78
Type: TC
Location: 91431 - 92870 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_79
Type: peptidase
Location: 92919 - 95168 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_80
Type: CAZyme
Location: 95182 - 97587 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_81
Type: CAZyme
Location: 97610 - 100012 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6306_82
Type: CAZyme
Location: 100080 - 102812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_6306_76 vegetarian > omnivore 2.10145 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6306_76 vegetarian > vegan 1.59636 0.01693
DianaHT_2018_SRR6795027_bin.3_k141_6306_81 vegan > omnivore 1.08748 0.01168

🧭 Explore Read Mapping of CGC

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