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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_7 5423 6976 - 2.A.47.4.5
pfam DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_8 6998 7816 - Inositol_P
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_9 8060 9667 - GH109
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_10 9680 13048 - GH2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_11 13128 15806 - GH2
sulfatase DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_12 15824 17344 - S1_15
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_13 17348 18574 - GH88
pfam DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_14 18707 20386 - SusD_RagB | SusD-like_3
TC DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_15 20401 23175 - 1.B.14.6.1
pfam DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_16 23206 25068 - SusD_RagB | SusD-like_3
TC DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_17 25090 28233 - 1.B.14.6.1
TF DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_18 28667 32617 - HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_19 32948 34387 + GH29
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_20 34399 35508 + GH105
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_21 35511 37580 + GH2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5997 DianaHT_2018_SRR6795027_bin.3_k141_5997_22 37696 39846 + PL8_3
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_7
Type: TC
Location: 5423 - 6976 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_8
Type: pfam
Location: 6998 - 7816 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_9
Type: CAZyme
Location: 8060 - 9667 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_10
Type: CAZyme
Location: 9680 - 13048 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_11
Type: CAZyme
Location: 13128 - 15806 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_12
Type: sulfatase
Location: 15824 - 17344 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_13
Type: CAZyme
Location: 17348 - 18574 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_14
Type: pfam
Location: 18707 - 20386 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_15
Type: TC
Location: 20401 - 23175 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_16
Type: pfam
Location: 23206 - 25068 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_17
Type: TC
Location: 25090 - 28233 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_18
Type: TF
Location: 28667 - 32617 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_19
Type: CAZyme
Location: 32948 - 34387 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_20
Type: CAZyme
Location: 34399 - 35508 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_21
Type: CAZyme
Location: 35511 - 37580 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5997_22
Type: CAZyme
Location: 37696 - 39846 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_5997_20 vegetarian > omnivore 1.42269 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_5997_20 vegetarian > vegan 2.24666 0.01693

🧭 Explore Read Mapping of CGC

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