Cluster: DianaHT_2018_SRR6795027_bin.3_CGC39
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_03945
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_36 | 34109 | 35002 | - | 9.B.2.1.6 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_37 | 35197 | 36231 | + | LRR_5 | LRR_5 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_38 | 36319 | 37932 | - | 3.A.1.121.4 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_39 | 38151 | 38783 | + | 3.A.8.1.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_40 | 38794 | 39975 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_41 | 40243 | 42870 | + | DUF4953 | DUF5117 | DUF5118 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_42 | 43025 | 46291 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_43 | 46312 | 47640 | + | SusD_RagB | SusD-like_3 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_44 | 47705 | 49795 | - | GDPD | BACON | Laminin_G_3 | GDPD_2 | BACON_2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_5904 | DianaHT_2018_SRR6795027_bin.3_k141_5904_45 | 49899 | 51893 | - | CBM51 | GH27 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_36
Type: TC
Location: 34109 - 35002 (-)
Type: TC
Location: 34109 - 35002 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_37
Type: pfam
Location: 35197 - 36231 (+)
Type: pfam
Location: 35197 - 36231 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_38
Type: TC
Location: 36319 - 37932 (-)
Type: TC
Location: 36319 - 37932 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_39
Type: TC
Location: 38151 - 38783 (+)
Type: TC
Location: 38151 - 38783 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_40
Type: pfam
Location: 38794 - 39975 (+)
Type: pfam
Location: 38794 - 39975 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_41
Type: pfam
Location: 40243 - 42870 (+)
Type: pfam
Location: 40243 - 42870 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_42
Type: TC
Location: 43025 - 46291 (+)
Type: TC
Location: 43025 - 46291 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_43
Type: pfam
Location: 46312 - 47640 (+)
Type: pfam
Location: 46312 - 47640 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_44
Type: pfam
Location: 47705 - 49795 (-)
Type: pfam
Location: 47705 - 49795 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_45
Type: CAZyme
Location: 49899 - 51893 (-)
Type: CAZyme
Location: 49899 - 51893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_5904_36 | vegetarian > omnivore | 1.79496 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_5904_36 | vegetarian > vegan | 1.27709 | 0.01693 |
| DianaHT_2018_SRR6795027_bin.3_k141_5904_37 | vegan > omnivore | 1.60340 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_5904_37 | vegetarian > omnivore | 2.19707 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_5904_43 | vegan > omnivore | 1.71483 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_5904_43 | vegetarian > omnivore | 1.16992 | 0.00085 |