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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_3 1627 2481 - CE4
pfam DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_4 2501 3085 - Hexapep | Hexapep_2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_5 3092 4303 - GT4
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_6 4306 5325 - NULL(UNKNOWN)
[View Structural Homologs]
pfam DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_7 5335 6516 - Epimerase_2
TC DianaHT_2018_SRR6795027_bin.3_k141_5904 DianaHT_2018_SRR6795027_bin.3_k141_5904_8 6694 7767 - 9.B.18.2.1
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_3
Type: CAZyme
Location: 1627 - 2481 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_4
Type: pfam
Location: 2501 - 3085 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_5
Type: CAZyme
Location: 3092 - 4303 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_6
Type:
Location: 4306 - 5325 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_7
Type: pfam
Location: 5335 - 6516 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5904_8
Type: TC
Location: 6694 - 7767 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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