Cluster: DianaHT_2018_SRR6795027_bin.3_CGC33
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_02734
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_103 | 113943 | 114518 | + | 1.A.78.2.5 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_104 | 114570 | 115388 | + | HTH_18 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_105 | 115468 | 115875 | + | PNPOx_N | Pyrid_ox_like |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_106 | 116028 | 117356 | + | 2.A.66.1.13 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_107 | 117452 | 118126 | + | 9.B.186.1.3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_108 | 118261 | 118995 | + | GT51 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_109 | 119030 | 120277 | + | T9SS_plug_1st |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_110 | 120364 | 121509 | - | Cyt_bd_oxida_II |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5523 | DianaHT_2018_SRR6795027_bin.3_k141_5523_111 | 121547 | 123100 | - | 3.D.4.3.2 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_103
Type: TC
Location: 113943 - 114518 (+)
Type: TC
Location: 113943 - 114518 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_104
Type: STP
Location: 114570 - 115388 (+)
Type: STP
Location: 114570 - 115388 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_105
Type: pfam
Location: 115468 - 115875 (+)
Type: pfam
Location: 115468 - 115875 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_106
Type: TC
Location: 116028 - 117356 (+)
Type: TC
Location: 116028 - 117356 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_107
Type: TC
Location: 117452 - 118126 (+)
Type: TC
Location: 117452 - 118126 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_108
Type: CAZyme
Location: 118261 - 118995 (+)
Type: CAZyme
Location: 118261 - 118995 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_109
Type: pfam
Location: 119030 - 120277 (+)
Type: pfam
Location: 119030 - 120277 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_110
Type: pfam
Location: 120364 - 121509 (-)
Type: pfam
Location: 120364 - 121509 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5523_111
Type: TC
Location: 121547 - 123100 (-)
Type: TC
Location: 121547 - 123100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_5523_104 | vegan > omnivore | 1.71925 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_5523_104 | vegetarian > omnivore | 2.32472 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_5523_105 | vegan > omnivore | 2.12391 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_5523_105 | vegetarian > omnivore | 2.18714 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_5523_109 | vegan > omnivore | 1.20056 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_5523_109 | vegetarian > omnivore | 1.77920 | 0.00085 |