Cluster: DianaHT_2018_SRR6795027_bin.3_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_5501 | DianaHT_2018_SRR6795027_bin.3_k141_5501_5 | 6148 | 7149 | + | GH43_3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_5501 | DianaHT_2018_SRR6795027_bin.3_k141_5501_6 | 7162 | 9471 | + | GH3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_5501 | DianaHT_2018_SRR6795027_bin.3_k141_5501_7 | 9615 | 12803 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_5501 | DianaHT_2018_SRR6795027_bin.3_k141_5501_8 | 12816 | 14528 | + | SusD_RagB | SusD-like_3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_5501 | DianaHT_2018_SRR6795027_bin.3_k141_5501_9 | 14624 | 16951 | + | GH139 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5501_5
Type: CAZyme
Location: 6148 - 7149 (+)
Type: CAZyme
Location: 6148 - 7149 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5501_6
Type: CAZyme
Location: 7162 - 9471 (+)
Type: CAZyme
Location: 7162 - 9471 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5501_7
Type: TC
Location: 9615 - 12803 (+)
Type: TC
Location: 9615 - 12803 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5501_8
Type: pfam
Location: 12816 - 14528 (+)
Type: pfam
Location: 12816 - 14528 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_5501_9
Type: CAZyme
Location: 14624 - 16951 (+)
Type: CAZyme
Location: 14624 - 16951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.