Cluster: DianaHT_2018_SRR6795027_bin.3_CGC22
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_92 | 130578 | 131450 | - | 2.A.115.1.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_93 | 131575 | 134649 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_94 | 135282 | 136184 | + | 2.A.7.3.36 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_95 | 136200 | 137708 | - | GH172 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_96 | 137743 | 138897 | - | GH172 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_97 | 138969 | 140687 | - | 8.A.46.3.2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_98 | 140701 | 143862 | - | 1.B.14.6.1 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_99 | 143981 | 147046 | - | CBM38 | GH116 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_3386 | DianaHT_2018_SRR6795027_bin.3_k141_3386_100 | 147154 | 149709 | - | GH116 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_92
Type: TC
Location: 130578 - 131450 (-)
Type: TC
Location: 130578 - 131450 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_93
Type: pfam
Location: 131575 - 134649 (-)
Type: pfam
Location: 131575 - 134649 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_94
Type: TC
Location: 135282 - 136184 (+)
Type: TC
Location: 135282 - 136184 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_95
Type: CAZyme
Location: 136200 - 137708 (-)
Type: CAZyme
Location: 136200 - 137708 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_96
Type: CAZyme
Location: 137743 - 138897 (-)
Type: CAZyme
Location: 137743 - 138897 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_97
Type: TC
Location: 138969 - 140687 (-)
Type: TC
Location: 138969 - 140687 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_98
Type: TC
Location: 140701 - 143862 (-)
Type: TC
Location: 140701 - 143862 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_99
Type: CAZyme
Location: 143981 - 147046 (-)
Type: CAZyme
Location: 143981 - 147046 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_3386_100
Type: CAZyme
Location: 147154 - 149709 (-)
Type: CAZyme
Location: 147154 - 149709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_3386_98 | vegan > omnivore | 2.37802 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_3386_98 | vegetarian > omnivore | 1.24975 | 0.00085 |