Cluster: DianaHT_2018_SRR6795027_bin.3_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00043
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_34 | 42717 | 44171 | + | 2.A.36.6.3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_35 | 44673 | 46337 | + | 4.C.1.1.16 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_36 | 46384 | 46572 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_37 | 46520 | 48544 | - | GH65 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_38 | 48646 | 49356 | + | DUF169 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_39 | 49624 | 51777 | - | GH97 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_40 | 51857 | 54355 | - | GH31 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_41 | 54604 | 56394 | - | GH66 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_42 | 56536 | 58029 | - | SusE | SusF_SusE | SusF_SusE |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_43 | 58052 | 59542 | - | 8.A.46.1.5 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_2414 | DianaHT_2018_SRR6795027_bin.3_k141_2414_44 | 59555 | 62554 | - | 1.B.14.6.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_34
Type: TC
Location: 42717 - 44171 (+)
Type: TC
Location: 42717 - 44171 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_35
Type: TC
Location: 44673 - 46337 (+)
Type: TC
Location: 44673 - 46337 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_36
Type:
Location: 46384 - 46572 (+)
Type:
Location: 46384 - 46572 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_37
Type: CAZyme
Location: 46520 - 48544 (-)
Type: CAZyme
Location: 46520 - 48544 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_38
Type: pfam
Location: 48646 - 49356 (+)
Type: pfam
Location: 48646 - 49356 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_39
Type: CAZyme
Location: 49624 - 51777 (-)
Type: CAZyme
Location: 49624 - 51777 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_40
Type: CAZyme
Location: 51857 - 54355 (-)
Type: CAZyme
Location: 51857 - 54355 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_41
Type: CAZyme
Location: 54604 - 56394 (-)
Type: CAZyme
Location: 54604 - 56394 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_42
Type: pfam
Location: 56536 - 58029 (-)
Type: pfam
Location: 56536 - 58029 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_43
Type: TC
Location: 58052 - 59542 (-)
Type: TC
Location: 58052 - 59542 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2414_44
Type: TC
Location: 59555 - 62554 (-)
Type: TC
Location: 59555 - 62554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_2414_34 | vegetarian > omnivore | 1.21889 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_2414_37 | vegan > omnivore | 1.75913 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_2414_37 | vegetarian > omnivore | 2.72449 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_2414_38 | vegan > omnivore | 1.33720 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_2414_38 | vegetarian > omnivore | 1.54314 | 0.00085 |