Cluster: DianaHT_2018_SRR6795027_bin.3_CGC104
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_03944
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_66 | 100732 | 103902 | - | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_67 | 104120 | 105352 | - | Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_68 | 105548 | 108169 | + | GH2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_69 | 108352 | 108831 | - | NlpE |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_70 | 108872 | 110191 | - | 9.A.40.2.2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13687 | DianaHT_2018_SRR6795027_bin.3_k141_13687_71 | 110263 | 111081 | + | CE1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_66
Type: TC
Location: 100732 - 103902 (-)
Type: TC
Location: 100732 - 103902 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_67
Type: pfam
Location: 104120 - 105352 (-)
Type: pfam
Location: 104120 - 105352 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_68
Type: CAZyme
Location: 105548 - 108169 (+)
Type: CAZyme
Location: 105548 - 108169 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_69
Type: pfam
Location: 108352 - 108831 (-)
Type: pfam
Location: 108352 - 108831 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_70
Type: TC
Location: 108872 - 110191 (-)
Type: TC
Location: 108872 - 110191 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13687_71
Type: CAZyme
Location: 110263 - 111081 (+)
Type: CAZyme
Location: 110263 - 111081 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_13687_67 | vegan > omnivore | 2.42190 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_13687_67 | vegetarian > omnivore | 2.54888 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_13687_68 | vegan > omnivore | 1.61914 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_13687_68 | vegetarian > omnivore | 1.88081 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_13687_71 | vegan > omnivore | 1.19954 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_13687_71 | vegetarian > omnivore | 1.87788 | 0.00085 |