Cluster: DianaHT_2018_SRR6795027_bin.3_CGC102
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 12
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_02732
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_9 | 7177 | 10404 | + | GH2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_10 | 10519 | 12582 | - | NosD | Alginate_lyase | Beta_helix |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_11 | 12614 | 14089 | - | CE20 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_12 | 14292 | 16811 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_13 | 16990 | 18900 | + | GH63 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_14 | 18913 | 21720 | + | GH31_4 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_15 | 21717 | 23453 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_16 | 23834 | 27004 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_17 | 27023 | 29068 | + | SusD_RagB | SusD-like_3 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_18 | 29088 | 29825 | + | DUF3823 | DUF3823_C |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_19 | 30259 | 33948 | + | GH2 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_20 | 34003 | 36600 | + | GH3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_21 | 36786 | 40190 | + | GH2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_22 | 40174 | 42999 | + | Pect-lyase_RHGA_epim |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_23 | 43367 | 46267 | + | GH2 |
| sulfatase | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_24 | 46424 | 47716 | + | S1_15 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_25 | 47720 | 49117 | + | CE20 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_26 | 49130 | 52786 | + | PL17 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_27 | 52819 | 55080 | + | GH92 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_13584 | DianaHT_2018_SRR6795027_bin.3_k141_13584_28 | 55090 | 57450 | + | GH3 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_9
Type: CAZyme
Location: 7177 - 10404 (+)
Type: CAZyme
Location: 7177 - 10404 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_10
Type: pfam
Location: 10519 - 12582 (-)
Type: pfam
Location: 10519 - 12582 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_11
Type: CAZyme
Location: 12614 - 14089 (-)
Type: CAZyme
Location: 12614 - 14089 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_12
Type:
Location: 14292 - 16811 (+)
Type:
Location: 14292 - 16811 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_13
Type: CAZyme
Location: 16990 - 18900 (+)
Type: CAZyme
Location: 16990 - 18900 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_14
Type: CAZyme
Location: 18913 - 21720 (+)
Type: CAZyme
Location: 18913 - 21720 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_15
Type:
Location: 21717 - 23453 (+)
Type:
Location: 21717 - 23453 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_16
Type: TC
Location: 23834 - 27004 (+)
Type: TC
Location: 23834 - 27004 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_17
Type: pfam
Location: 27023 - 29068 (+)
Type: pfam
Location: 27023 - 29068 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_18
Type: pfam
Location: 29088 - 29825 (+)
Type: pfam
Location: 29088 - 29825 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_19
Type: CAZyme
Location: 30259 - 33948 (+)
Type: CAZyme
Location: 30259 - 33948 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_20
Type: CAZyme
Location: 34003 - 36600 (+)
Type: CAZyme
Location: 34003 - 36600 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_21
Type: CAZyme
Location: 36786 - 40190 (+)
Type: CAZyme
Location: 36786 - 40190 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_22
Type: pfam
Location: 40174 - 42999 (+)
Type: pfam
Location: 40174 - 42999 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_23
Type: CAZyme
Location: 43367 - 46267 (+)
Type: CAZyme
Location: 43367 - 46267 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_24
Type: sulfatase
Location: 46424 - 47716 (+)
Type: sulfatase
Location: 46424 - 47716 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_25
Type: CAZyme
Location: 47720 - 49117 (+)
Type: CAZyme
Location: 47720 - 49117 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_26
Type: CAZyme
Location: 49130 - 52786 (+)
Type: CAZyme
Location: 49130 - 52786 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_27
Type: CAZyme
Location: 52819 - 55080 (+)
Type: CAZyme
Location: 52819 - 55080 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_13584_28
Type: CAZyme
Location: 55090 - 57450 (+)
Type: CAZyme
Location: 55090 - 57450 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.