Cluster: DianaHT_2018_SRR6795027_bin.13_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.13
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_9 | 8834 | 9931 | - | GH105 |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_10 | 9955 | 11724 | - | 8.A.46.1.6 |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_11 | 11736 | 14825 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_12 | 14925 | 16910 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_13 | 17135 | 18373 | - | GH154 |
| CAZyme | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_14 | 18397 | 19626 | - | GH154 |
| TF | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_15 | 19801 | 23817 | + | HTH_AraC |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_16 | 23927 | 25546 | - | 3.A.1.121.4 |
| pfam | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_17 | 25723 | 26334 | + | GrpE |
| pfam | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_18 | 26348 | 27517 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_821 | DianaHT_2018_SRR6795027_bin.13_k141_821_19 | 27597 | 29510 | - | 9.B.18.2.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_9
Type: CAZyme
Location: 8834 - 9931 (-)
Type: CAZyme
Location: 8834 - 9931 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_10
Type: TC
Location: 9955 - 11724 (-)
Type: TC
Location: 9955 - 11724 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_11
Type: TC
Location: 11736 - 14825 (-)
Type: TC
Location: 11736 - 14825 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_12
Type:
Location: 14925 - 16910 (-)
Type:
Location: 14925 - 16910 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_13
Type: CAZyme
Location: 17135 - 18373 (-)
Type: CAZyme
Location: 17135 - 18373 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_14
Type: CAZyme
Location: 18397 - 19626 (-)
Type: CAZyme
Location: 18397 - 19626 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_15
Type: TF
Location: 19801 - 23817 (+)
Type: TF
Location: 19801 - 23817 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_16
Type: TC
Location: 23927 - 25546 (-)
Type: TC
Location: 23927 - 25546 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_17
Type: pfam
Location: 25723 - 26334 (+)
Type: pfam
Location: 25723 - 26334 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_18
Type: pfam
Location: 26348 - 27517 (+)
Type: pfam
Location: 26348 - 27517 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_821_19
Type: TC
Location: 27597 - 29510 (-)
Type: TC
Location: 27597 - 29510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
CABUKU01
Species
CABUKU01 sp902492205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.