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Cluster: DianaHT_2018_SRR6795027_bin.13_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_33 33515 35842 - GH20
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_34 35839 37290 - GH125
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_35 37304 38926 - GH63
pfam DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_36 38941 40083 - Alk_phosphatase | Metalloenzyme
pfam DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_37 40108 40980 - Exo_endo_phos
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_38 40999 43995 - GH92
TC DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_39 44109 45635 - 8.A.46.1.3
TC DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_40 45648 49082 - 1.B.14.6.1
STP DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_41 49184 50209 - FecR
STP DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_42 50293 50874 - Sigma70_r2 | Sigma70_r4_2
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_43 51318 53564 - GH3
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_44 53583 54866 - GH158
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_45 54882 55739 - GH16_3
pfam DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_46 55749 57425 - SusD_RagB | SusD-like_3
TC DianaHT_2018_SRR6795027_bin.13_k141_15608 DianaHT_2018_SRR6795027_bin.13_k141_15608_47 57444 60527 - 1.B.14.6.1
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_33
Type: CAZyme
Location: 33515 - 35842 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_34
Type: CAZyme
Location: 35839 - 37290 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_35
Type: CAZyme
Location: 37304 - 38926 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_36
Type: pfam
Location: 38941 - 40083 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_37
Type: pfam
Location: 40108 - 40980 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_38
Type: CAZyme
Location: 40999 - 43995 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_39
Type: TC
Location: 44109 - 45635 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_40
Type: TC
Location: 45648 - 49082 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_41
Type: STP
Location: 49184 - 50209 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_42
Type: STP
Location: 50293 - 50874 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_43
Type: CAZyme
Location: 51318 - 53564 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_44
Type: CAZyme
Location: 53583 - 54866 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_45
Type: CAZyme
Location: 54882 - 55739 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_46
Type: pfam
Location: 55749 - 57425 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_15608_47
Type: TC
Location: 57444 - 60527 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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